Biography
Publications
Automated Membrane Detection and Subtraction for Structure Determination of Membrane Proteins in Cryogenic Electron Microscopy
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR) Workshops
Machine Learning Models Based on Histological Images from Healthy Donors Identify ImageQTLs and Predict Chronological Age
REliable PIcking by Consensus (REPIC): a consensus methodology for harnessing multiple cryo-EM particle pickers
Communications Biology, Vol. 7, Issue 1
Posterior inference of Hi-C contact frequency through sampling
Frontiers in Bioinformatics, Vol. 3
The EN-TEx resource of multi-tissue personal epigenomes & variant-impact models
Cell, Vol. 186, Issue 7, Pages 1493-1511.e40
Nodal modulator (NOMO) is required to sustain endoplasmic reticulum morphology
Journal of Biological Chemistry, Vol. 297, Issue 2, Pages 100937
LAMPS: an analysis pipeline for sequence-specific ligation-mediated amplification reads
BMC Research Notes, Vol. 13, Issue 1
HIFI: estimating DNA-DNA interaction frequency from Hi-C data at restriction-fragment resolution
Genome Biology
SACSANN: identifying sequence-based determinants of chromosomal compartments
LESSeq: Local event-based analysis of alternative splicing using RNA-Seq data
2C-ChIP: measuring chromatin immunoprecipitation signal from defined genomic regions with deep sequencing
BMC Genomics, Vol. 20, Issue 1
Efficient Homology Directed Repair by Cas9:DNA Localization and Cationic Polymeric Transfection in Mammalian Cells
PAM multiplicity marks genomic target sites as inhibitory to CRISPR-Cas9 editing
Nature Communications, Vol. 6, Issue 1
Classifying and scoring of molecules with the NGN: new datasets, significance tests, and generalization
BMC Bioinformatics, Vol. 11, Issue S8